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1.
Hum Mol Genet ; 33(4): 355-373, 2024 Feb 01.
Article En | MEDLINE | ID: mdl-37944084

GRID1 and GRID2 encode the enigmatic GluD1 and GluD2 proteins, which form tetrameric receptors that play important roles in synapse organization and development of the central nervous system. Variation in these genes has been implicated in neurodevelopmental phenotypes. We evaluated GRID1 and GRID2 human variants from the literature, ClinVar, and clinical laboratories and found that many of these variants reside in intolerant domains, including the amino terminal domain of both GRID1 and GRID2. Other conserved regions, such as the M3 transmembrane domain, show different intolerance between GRID1 and GRID2. We introduced these variants into GluD1 and GluD2 cDNA and performed electrophysiological and biochemical assays to investigate the mechanisms of dysfunction of GRID1/2 variants. One variant in the GRID1 distal amino terminal domain resides at a position predicted to interact with Cbln2/Cbln4, and the variant disrupts complex formation between GluD1 and Cbln2, which could perturb its role in synapse organization. We also discovered that, like the lurcher mutation (GluD2-A654T), other rare variants in the GRID2 M3 domain create constitutively active receptors that share similar pathogenic phenotypes. We also found that the SCHEMA schizophrenia M3 variant GluD1-A650T produced constitutively active receptors. We tested a variety of compounds for their ability to inhibit constitutive currents of GluD receptor variants and found that pentamidine potently inhibited GluD2-T649A constitutive channels (IC50 50 nM). These results identify regions of intolerance to variation in the GRID genes, illustrate the functional consequences of GRID1 and GRID2 variants, and suggest how these receptors function normally and in disease.


Central Nervous System , Receptors, Glutamate , Humans , Central Nervous System/metabolism , Mutation , Protein Domains , Receptors, Glutamate/metabolism
2.
J Genet Couns ; 31(1): 252-260, 2022 02.
Article En | MEDLINE | ID: mdl-34265137

Numerous US states have implemented newborn screening for Krabbe disease (Krabbe NBS) as a result of legislative state mandates. While healthcare provider opinions toward Krabbe NBS have been documented, few studies have explored parental experiences and opinions regarding Krabbe NBS. Eleven families, who received a false-positive Krabbe NBS result and received genetic counseling at an institution in central Ohio, were consented to participate in semistructured interviews. Interviews explored parents' experiences throughout the NBS process and ascertained their opinions regarding Krabbe NBS. Three major themes emerged from thematic analysis: (1) improved understanding of the NBS process from a parent perspective, (2) the role of healthcare provider communication, and (3) the value of Krabbe NBS. Parents saw value in Krabbe NBS, despite many disclosing emotional distress and uncertainty throughout the NBS process. Parent experiences throughout the NBS process varied widely. Due to the expressed emotional distress, further research assessing effective communication during the NBS process is warranted. The researchers suggest additional NBS education for non-genetics healthcare providers (i.e., nurses or primary care physicians) and further participation of genetic counselors in the NBS process may benefit families with a positive Krabbe NBS result.


Leukodystrophy, Globoid Cell , Neonatal Screening , Genetic Counseling , Health Personnel/psychology , Humans , Infant, Newborn , Leukodystrophy, Globoid Cell/diagnosis , Neonatal Screening/psychology , Parents/psychology
3.
J Hum Genet ; 64(6): 561-572, 2019 Jun.
Article En | MEDLINE | ID: mdl-30858506

Variants have been identified in the embryonic ectoderm development (EED) gene in seven patients with syndromic overgrowth similar to that observed in Weaver syndrome. Here, we present three additional patients with missense variants in the EED gene. All the missense variants reported to date (including the three presented here) have localized to one of seven WD40 domains of the EED protein, which are necessary for interaction with enhancer of zeste 2 polycomb repressive complex 2 subunit (EZH2). In addition, among the seven patients reported in the literature and the three new patients presented here, all of the reported pathogenic variants except one occurred at one of four amino acid residues in the EED protein. The recurrence of pathogenic variation at these loci suggests that these residues are functionally important (mutation hotspots). In silico modeling and calculations of the free energy changes resulting from these variants suggested that they not only destabilize the EED protein structure but also adversely affect interactions between EED, EZH2, and/or H3K27me3. These cases help demonstrate the mechanism(s) by which apparently deleterious variants in the EED gene might cause overgrowth and lend further support that amino acid residues in the WD40 domain region may be mutation hotspots.


Abnormalities, Multiple/genetics , Congenital Hypothyroidism/genetics , Craniofacial Abnormalities/genetics , Enhancer of Zeste Homolog 2 Protein/genetics , Hand Deformities, Congenital/genetics , Histone-Lysine N-Methyltransferase/genetics , Polycomb Repressive Complex 2/genetics , Abnormalities, Multiple/etiology , Abnormalities, Multiple/physiopathology , Adolescent , Child , Computer Simulation , Congenital Hypothyroidism/etiology , Congenital Hypothyroidism/physiopathology , Craniofacial Abnormalities/etiology , Craniofacial Abnormalities/physiopathology , Enhancer of Zeste Homolog 2 Protein/chemistry , Female , Hand Deformities, Congenital/etiology , Hand Deformities, Congenital/physiopathology , Histone-Lysine N-Methyltransferase/chemistry , Humans , Male , Molecular Dynamics Simulation , Mutation Rate , Mutation, Missense/genetics , Polycomb Repressive Complex 2/chemistry , Protein Conformation , WD40 Repeats/genetics , Exome Sequencing
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